| Name | Population | Latitude/Longitude |
| 1 | São Tomé , São Tomé Island |
53,300 |
0.338 / 6.73 |
| 2 | Neves , São Tomé Island |
8,391 |
0.357 / 6.549 |
| 3 | Água Izé , São Tomé Island |
7,445 |
0.22 / 6.728 |
| 4 | Folha Fede , São Tomé Island |
6,685 |
0.284 / 6.684 |
| 5 | Riboque , São Tomé Island |
4,640 |
0.335 / 6.723 |
| 6 | Almas, São Tomé Island |
4,601 |
0.299 / 6.745 |
| 7 | Pantufo, São Tomé Island |
3,977 |
0.315 / 6.743 |
| 8 | Dona Eugénia , São Tomé Island |
3,605 |
0.14 / 6.611 |
| 9 | Rosema, São Tomé Island |
2,587 |
0.351 / 6.569 |
| 10 | Bombom , Príncipe |
1,754 |
0.311 / 6.728 |
| 11 | Almeirim , São Tomé Island |
1,591 |
0.317 / 6.717 |
| 12 | Piedade, São Tomé Island |
1,408 |
0.296 / 6.664 |